Basic Information
Locus ID:
Pt_Chr0703707
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 109487981 | 109492814 | + | Pt_Chr0703707 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 50,923.51 Da | 44.99 | 91.53 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 178 | 270 | 7.6E-7 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 57 | 154 | 2.4E-17 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 384 | 466 | 2.6E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 352 | 470 | 4.49E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 55 | 157 | 6.8E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 167 | 272 | 1.3E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 342 | 456 | 7.0E-33 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 52 | 157 | 18.634199 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 165 | 274 | 13.402084 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 382 | 478 | 14.506444 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 388 | 409 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_051187926.1 | cysteine-rich receptor-like protein kinase 10 [Lolium perenne] | 0 |
| Q0D5R2 | Cysteine-rich receptor-like protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0AL10 | Protein kinase domain-containing protein OS=Oryza glumipatula OX=40148 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_037812 |
| Poaceae | Oryza coarctata | 2 | Oco07G002850, Oco08G017450 |
| Poaceae | Oryza sativa | 3 | LOC_Os04g25060.1, LOC_Os04g25650.1, LOC_Os04g56430.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0703707 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG070520, gene_TRIDC6BG000330 |
| Poaceae | Triticum aestivum | 2 | TraesCS3B02G580400.1, TraesCSU02G066500.1.cds1 |