Basic Information
Locus ID:
Pt_Chr0703697
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the adaptor complexes medium subunit family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 109043570 | 109047152 | + | Pt_Chr0703697 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 38,127.09 Da | 49.03 | 88.42 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20790.4 | - | 0 |
| RefSeq | XP_051205561.1 | AP-5 complex subunit mu [Lolium perenne] | 0 |
| Q8W0Z6 | AP-5 complex subunit mu OS=Arabidopsis thaliana OX=3702 GN=AP5M PE=2 SV=1 | 0 | |
| TrEMBL | A0A453K186 | MHD domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg12492 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_10811 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah014763 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g198430 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg25166, Sbi_jg9009 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg19582 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00007635 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl42443, Sgl47172 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000008827, gene:ENSEOMG00000010996 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0018380, CQ.Regalona.r1.8BG0023990 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30238010, pistato.v30238020 |
| Apiaceae | Apium graveolens | 1 | Ag1G01921 |
| Arecaceae | Cocos nucifera | 1 | COCNU_12G004270 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103709908 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.3227.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri16G04359 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G20790.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10003762m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g27240.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g008200.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G1265 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G1353 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g05560 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g17010 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG11.1412 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00026245 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G00113 |
| Poaceae | Echinochloa crus-galli | 3 | AH05.3627, BH05.3648, CH05.3827 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0392480, gene-QOZ80_5BG0440810 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0447110.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_017812 |
| Poaceae | Oryza coarctata | 1 | Oco24G007200 |
| Poaceae | Oryza sativa | 1 | LOC_Os12g34370.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_08G084500 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0703697, Pt_Chr0703700 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr04G016200, Chr06G016900, Chr19G009910, Chr27G006520 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G191000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG014460, gene_TRIDC5BG017260 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G099300.2, TraesCS5B02G104600.2 ... |
| Poaceae | Zea mays | 1 | Zm00001eb410820_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-30225 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g25907 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.2715, evm.TU.LG23.926 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g12070 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.671 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-16011 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4120 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-563 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.405 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00007513 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-15369 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-3411 |
| Salicaceae | Populus euphratica | 1 | populus_peu22014 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132645027 |
| Solanaceae | Solanum chilense | 1 | SOLCI003038500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107008293 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_9381 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1504 |
| Zosteraceae | Zostera marina | 1 | Zosma02g24600.v3.1 |