Basic Information
Locus ID:
Pt_Chr0703567
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 104714485 | 104719562 | + | Pt_Chr0703567 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 52,865.45 Da | 57.92 | 52.38 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 382 | 439 | 5.0E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 225 | 281 | 1.2E-23 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 373 | 441 | 7.32E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 223 | 283 | 4.84E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 365 | 442 | 1.4E-34 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 212 | 284 | 1.6E-26 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 381 | 440 | 6.1E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 224 | 282 | 1.2E-33 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 225 | 283 | 23.272785 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 376 | 441 | 36.953846 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 312 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_051185401.1 | probable WRKY transcription factor 3 [Lolium perenne] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8I7BDZ8 | WRKY transcription factor 3 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology