Basic Information
Locus ID:
Pt_Chr0703399
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 95131235 | 95134225 | - | Pt_Chr0703399 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 62,404.78 Da | 46.05 | 86.63 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 73 | 331 | 9.29449E-135 | - |
| Pfam | PF13499 | EF-hand domain pair | 450 | 509 | 8.1E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 74 | 332 | 2.4E-75 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 378 | 438 | 2.4E-11 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 362 | 510 | 3.39E-38 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 71 | 340 | 2.7E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 76 | 159 | 5.4E-27 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 340 | 512 | 6.7E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 160 | 339 | 1.3E-58 | - |
| SMART | SM00054 | efh_1 | 451 | 479 | 3.1 | IPR002048 |
| SMART | SM00220 | serkin_6 | 74 | 332 | 9.3E-99 | IPR000719 |
| SMART | SM00054 | efh_1 | 379 | 407 | 0.0015 | IPR002048 |
| SMART | SM00054 | efh_1 | 484 | 512 | 0.0019 | IPR002048 |
| SMART | SM00054 | efh_1 | 415 | 443 | 0.86 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 447 | 482 | 13.230217 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 485 | 515 | 10.635944 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 375 | 410 | 14.262346 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 74 | 332 | 48.936867 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 411 | 446 | 8.376417 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 388 | 400 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 460 | 472 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 424 | 436 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 194 | 206 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 493 | 505 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 80 | 103 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_047044635.1 | calcium-dependent protein kinase 29-like [Lolium rigidum] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7QAF1 | Calcium-dependent protein kinase 30 OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology