Basic Information
Locus ID:
Pt_Chr0703174
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Short Name:
BASS2
Description:
SBF-like CPA transporter family (DUF4137)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 82570908 | 82576097 | - | Pt_Chr0703174 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 65,774.79 Da | 40.01 | 76.21 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 138 | 471 | 1.1E-12 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 163 | 512 | 2.0E-7 | IPR015943 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004985967.1 | uncharacterized protein LOC101761621 [Setaria italica] | 0 |
| TrEMBL | K4A8P2 | WD_REPEATS_REGION domain-containing protein OS=Setaria italica OX=4555 GN=101761621 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0703174 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G156500 |