Basic Information
Locus ID:
Pt_Chr0702726
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 64896414 | 64900040 | - | Pt_Chr0702726 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 128,265.54 Da | 34.56 | 101.61 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 689 | 744 | 3.8E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 71 | 4.4E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 907 | 1176 | 6.4E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 351 | 408 | 3.0E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 173 | 197 | 1.6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 887 | 1178 | 1.5E-74 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 82 | 443 | 1.41E-60 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 505 | 800 | 2.95E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 166 | 2.8E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.1490.310 | - | 624 | 681 | 4.7E-274 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 172 | 801 | 4.7E-274 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 982 | 1194 | 2.7E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 868 | 981 | 1.1E-36 | - |
| SMART | SM00220 | serkin_6 | 906 | 1178 | 2.8E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 906 | 1183 | 38.477707 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1028 | 1040 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 912 | 935 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55610.1 | BRI1 like. mutant has Altered vascular cell differentiation; LRR Receptor Kinase | 0 |
| RefSeq | XP_051186679.1 | brassinosteroid LRR receptor kinase BRL1 [Lolium perenne] | 0 |
| Q69JN6 | Brassinosteroid LRR receptor kinase BRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRL1 PE=2 SV=1 | 0 | |
| TrEMBL | I1IP60 | non-specific serine/threonine protein kinase OS=Brachypodium distachyon OX=15368 GN=100835156 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology