Basic Information
Locus ID:
Pt_Chr0702615
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 61272311 | 61275719 | + | Pt_Chr0702615 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 102,412.69 Da | 35.81 | 103.40 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 195 | 216 | 1.9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 65 | 8.7E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 666 | 930 | 5.1E-47 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 482 | 501 | 1.1 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 76 | 398 | 1.02E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 315 | 574 | 1.84E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 655 | 932 | 2.16E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 743 | 949 | 3.1E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 309 | 2.8E-71 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 312 | 595 | 1.5E-79 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 647 | 742 | 2.3E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 216 | 240 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 479 | 503 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 141 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 167 | 192 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 264 | 288 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 117 | 130.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 664 | 932 | 8.1E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 664 | 934 | 37.445927 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 787 | 799 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_047046574.1 | receptor-like protein kinase HSL1 [Lolium rigidum] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KF07 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology