Basic Information
Locus ID:
Pt_Chr0702533
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 58373752 | 58380209 | - | Pt_Chr0702533 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.50 | 55,324.89 Da | 44.93 | 64.50 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 153 | 430 | 6.20227E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 151 | 427 | 4.3E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 133 | 458 | 1.09E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 127 | 232 | 1.3E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 233 | 452 | 3.6E-63 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 147 | 431 | 39.43882 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 276 | 288 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 153 | 185 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 123 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_051186934.1 | serine/threonine-protein kinase PBL34-like isoform X1 [Lolium perenne] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | F2E6S8 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology