Basic Information
Locus ID:
Pt_Chr0702525
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 58145477 | 58151913 | - | Pt_Chr0702525 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 55,582.18 Da | 44.72 | 64.69 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 156 | 433 | 1.97783E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 154 | 430 | 1.6E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 136 | 461 | 2.46E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 236 | 455 | 2.5E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 130 | 235 | 1.3E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 150 | 434 | 39.43882 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 156 | 188 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 279 | 291 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 505 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_051186934.1 | serine/threonine-protein kinase PBL34-like isoform X1 [Lolium perenne] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | F2E6S8 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology