Basic Information
Locus ID:
Pt_Chr0702491
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 57464129 | 57466885 | - | Pt_Chr0702491 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 48,502.74 Da | 41.89 | 77.52 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 5 | 56 | 4.7E-10 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 210 | 393 | 5.7E-25 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 219 | 406 | 9.31E-39 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 209 | 418 | 5.9E-46 | - |
| SMART | SM00220 | serkin_6 | 82 | 396 | 1.2E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 14 | 396 | 21.163557 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 250 | 262 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02070.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_047051474.1 | wall-associated receptor kinase 3-like [Lolium rigidum] | 0 |
| Q9LZM4 | Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana OX=3702 GN=WAKL20 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2CWH0 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_3g10860v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology