Basic Information
Locus ID:
Pt_Chr0702456
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 56666672 | 56667139 | + | Pt_Chr0702456 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 17,473.93 Da | 65.69 | 81.10 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 60 | 117 | 6.09213E-21 | - |
| Pfam | PF00651 | BTB/POZ domain | 58 | 117 | 1.4E-17 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 57 | 121 | 1.88E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 29 | 129 | 3.0E-20 | IPR011333 |
| SMART | SM00225 | BTB_4 | 59 | 152 | 2.0E-10 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 59 | 122 | 16.920921 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_051221149.1 | uncharacterized protein LOC127339325 [Lolium perenne] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835FWL6 | Speckle-type POZ protein OS=Digitaria exilis OX=1010633 GN=HU200_003544 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0604802, Pt_Chr0702456 |