Basic Information
Locus ID:
Pt_Chr0702428
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 55757706 | 55759854 | - | Pt_Chr0702428 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.07 | 52,097.18 Da | 51.99 | 82.29 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 117 | 156 | 2.4E-7 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 304 | 401 | 1.8E-8 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 117 | 165 | 7.85E-10 | IPR036047 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 220 | 448 | 1.57E-7 | IPR011043 |
| Gene3D | G3DSA:1.20.1280.50 | - | 113 | 165 | 3.3E-7 | - |
| SMART | SM00256 | fbox_2 | 117 | 157 | 2.7E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 206 | 407 | 1.1E-24 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051187368.1 | putative F-box protein At2g02030 [Lolium perenne] | 0 |
| TrEMBL | M0VNK8 | Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology