Basic Information
Locus ID:
Pt_Chr0702314
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 52105019 | 52107352 | - | Pt_Chr0702314 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 27,774.94 Da | 36.55 | 103.93 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 7 | 238 | 3.8E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 237 | 2.56E-50 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 239 | 1.5E-51 | - |
| SMART | SM00220 | serkin_6 | 1 | 238 | 2.5E-11 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 3 | 239 | 1.1E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 239 | 28.97966 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 96 | 108 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.3 | - | 0 |
| RefSeq | XP_004979043.1 | disease resistance protein RPM1 [Setaria italica] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A3B6SQS1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH04.2252, CH04.2661 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0221540.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049244 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0702314, Pt_Chr0702315, Pt_Chr0702317 |
| Poaceae | Triticum aestivum | 2 | TraesCS3D02G022700.2, TraesCS7B02G357700.1 |