Basic Information
Locus ID:
Pt_Chr0702066
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 44695902 | 44698844 | - | Pt_Chr0702066 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 40,685.41 Da | 36.86 | 86.69 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 3 | 253 | 2.8E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 255 | 3.78E-56 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 270 | 9.4E-58 | - |
| SMART | SM00220 | serkin_6 | 1 | 254 | 1.3E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 259 | 30.760544 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 114 | 126 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23130.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 5. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_044385798.1 | mitogen-activated protein kinase mpkC-like [Triticum aestivum] | 0 |
| Q9C5S8 | Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=1 SV=1 | 0 | |
| TrEMBL | I1R1I8 | Protein kinase domain-containing protein OS=Oryza glaberrima OX=4538 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology