Basic Information
Locus ID:
Pt_Chr0701726
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 37039676 | 37044746 | + | Pt_Chr0701726 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 83,134.93 Da | 43.14 | 77.77 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 83 | 279 | 3.88535E-99 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 97 | 256 | 1.5E-11 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 261 | 597 | 9.3E-137 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 601 | 711 | 8.8E-23 | IPR001404 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 331 | 589 | 6.45E-90 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 74 | 289 | 1.31E-60 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 602 | 683 | 2.48E-14 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 329 | 506 | 6.5E-74 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 507 | 597 | 7.0E-33 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 60 | 304 | 4.3E-88 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 598 | 687 | 1.3E-23 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 96 | 258 | 0.0017 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 54 | 600 | 3.7E-199 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 595 | 727 | 2.7E-14 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 94 | 103 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 265 | 283 | 1.6E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 74 | 94 | 1.6E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 144 | 161 | 1.6E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 162 | 179 | 1.6E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 95 | 117 | 1.6E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 191 | 213 | 1.6E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 246 | 263 | 1.6E-62 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 66 | 684 | 23.896311 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 694 | 735 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 723 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_047048204.1 | heat shock protein 90-5, chloroplastic-like [Lolium rigidum] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | Q43638 | Heat-shock protein OS=Secale cereale OX=4550 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology