Basic Information
Locus ID:
Pt_Chr0701693
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 36370322 | 36373515 | - | Pt_Chr0701693 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.84 | 60,588.02 Da | 50.74 | 89.38 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 218 | 319 | 6.1E-5 | IPR013187 |
| Pfam | PF00646 | F-box domain | 20 | 53 | 1.5E-6 | IPR001810 |
| SUPERFAMILY | SSF69322 | Tricorn protease domain 2 | 117 | 358 | 1.96E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 67 | 8.5E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 6 | 57 | 2.4E-7 | - |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 111 | 330 | 1.2E-23 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_040246437.1 | F-box protein At3g07870 isoform X3 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9SFC7 | F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811NA94 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS12647 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology