halophFGD

Basic Information

Locus ID: Pt_Chr0701673

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: Belongs to the glycosyltransferase 8 family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr07	36007315	36011192	-	Pt_Chr0701673

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.70	79,095.04 Da	41.55	80.79	-0.51

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd06429	GT8_like_1	402	696	4.45887E-122	-
Pfam	PF01501	Glycosyl transferase family 8	371	682	4.8E-90	IPR002495
SUPERFAMILY	SSF53448	Nucleotide-diphospho-sugar transferases	403	708	2.67E-68	IPR029044
Gene3D	G3DSA:3.90.550.10	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	404	701	6.9E-45	IPR029044
MobiDBLite	mobidb-lite	consensus disorder prediction	122	185	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	139	179	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	201	229	-	-
Coils	Coil	Coil	281	301	-	-
Coils	Coil	Coil	333	353	-	-

Gene Ontology

Molecular Function:

GO:0016757 (glycosyltransferase activity)

KEGG Pathway

KO Term:

K13648 (alpha-1,4-galacturonosyltransferase [EC:2.4.1.43])

Pathway:

ko00520 (Amino sugar and nucleotide sugar metabolism) map00520 (Amino sugar and nucleotide sugar metabolism)

Reaction:

R05191 (n UDP-D-galacturonate <=> n UDP + Pectin)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G47780.1	galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity.
RefSeq	XP_051188320.1	probable galacturonosyltransferase 4 [Lolium perenne]
Swiss-Prot	Q93ZX7	Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1
TrEMBL	A0A8R7UHS8	Hexosyltransferase OS=Triticum urartu OX=4572 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg11851, jg21753, jg24728, jg38531, jg5793
Aizoaceae	Mesembryanthemum crystallinum	2	gene_1376, gene_7383
Amaranthaceae	Atriplex hortensis	3	Ah009388, Ah017237, Ah023114
Amaranthaceae	Beta vulgaris	2	BVRB_8g184210, BVRB_9g212470
Amaranthaceae	Salicornia bigelovii	7	Sbi_jg10912, Sbi_jg10914, Sbi_jg25778, Sbi_jg4385 ... Sbi_jg47422, Sbi_jg49300, Sbi_jg9605
Amaranthaceae	Salicornia europaea	4	Seu_jg19038, Seu_jg21664, Seu_jg21665, Seu_jg5806
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00000340, GOSA_00012461, GOSA_00018757
Amaranthaceae	Suaeda glauca	6	Sgl11211, Sgl16606, Sgl41771, Sgl46571, Sgl55604, Sgl60818
Amaranthaceae	Chenopodium album	9	gene:ENSEOMG00000008981, gene:ENSEOMG00000016275 ... gene:ENSEOMG00000016387, gene:ENSEOMG00000030257, gene:ENSEOMG00000033053, gene:ENSEOMG00000036783, gene:ENSEOMG00000045706, gene:ENSEOMG00000047046, gene:ENSEOMG00000051576
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.1AG0005700, CQ.Regalona.r1.2BG0023960 ... CQ.Regalona.r1.5AG0027880, CQ.Regalona.r1.7BG0001710, CQ.Regalona.r1.8BG0000060, CQ.Regalona.r1.9AG0001460
Anacardiaceae	Pistacia vera	4	pistato.v30003430, pistato.v30025850, pistato.v30066330 ... pistato.v30108770
Apiaceae	Apium graveolens	3	Ag10G00267, Ag1G01711, Ag5G01116
Arecaceae	Cocos nucifera	7	COCNU_01G013080, COCNU_07G008710, COCNU_09G000910 ... COCNU_11G011170, scaffold000650G000020, scaffold016239G000100, scaffold045783G000010
Arecaceae	Phoenix dactylifera	9	gene-LOC103696144, gene-LOC103696960, gene-LOC103701120 ... gene-LOC103701177, gene-LOC103702363, gene-LOC103702796, gene-LOC103710668, gene-LOC103720912, gene-LOC103720921
Asparagaceae	Asparagus officinalis	8	AsparagusV1_01.1144.V1.1, AsparagusV1_01.1145.V1.1 ... AsparagusV1_01.3287.V1.1, AsparagusV1_01.512.V1.1, AsparagusV1_04.1381.V1.1, AsparagusV1_04.600.V1.1, AsparagusV1_05.2164.V1.1, AsparagusV1_05.734.V1.1
Asteraceae	Flaveria trinervia	6	Ftri11G26352, Ftri13G02954, Ftri5G18793, Ftri7G22982 ... FtriNA19628, FtriNA24316
Brassicaceae	Arabidopsis thaliana	4	AT2G46480.1, AT3G61130.1, AT4G38270.1, AT5G47780.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10000819m.g.v1.0, Thhalv10005820m.g.v1.0 ... Thhalv10024734m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp2g12520.v2.2, Sp4g28480.v2.2, Sp5g02250.v2.2 ... Sp7g37450.v2.2
Brassicaceae	Brassica nigra	6	BniB02g064450.2N, BniB02g089750.2N, BniB04g009990.2N ... BniB06g062190.2N, BniB08g075230.2N, BniS06172g250.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G0452, Ceq02G1435, Ceq07G1819
Casuarinaceae	Casuarina glauca	5	Cgl02G0481, Cgl02G1479, Cgl07G1975, Cgl07G1982, Cgl07G2023
Cymodoceaceae	Cymodocea nodosa	5	gene.Cymno01g04630, gene.Cymno02g10290, gene.Cymno06g09670 ... gene.Cymno14g07660, gene.Cymno18g02790
Hydrocharitaceae	Thalassia testudinum	5	gene.Thate02g03430, gene.Thate02g03440, gene.Thate05g09190 ... gene.Thate06g06710, gene.Thate09g19100
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-3602, nbisL1-mrna-7766
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG04.982, evm.TU.LG08.425, evm.TU.LG12.1305
Plantaginaceae	Plantago ovata	3	Pov_00006118, Pov_00007056, Pov_00027481
Plumbaginaceae	Limonium bicolor	3	Lb2G10516, Lb4G21745, Lb4G22952
Poaceae	Echinochloa crus-galli	17	AH01.990, AH03.2339, AH03.2713, AH06.3035, AH08.1105 ... AH08.1932, BH03.2470, BH03.2856, BH06.2822, BH08.1097, BH08.2025, CH01.1181, CH03.2664, CH03.3062, CH08.1208, CH08.2203, Contig181.188
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_3AG0220960, gene-QOZ80_3BG0266120 ... gene-QOZ80_6AG0528440, gene-QOZ80_6AG0539030, gene-QOZ80_6AG0551370, gene-QOZ80_6BG0482450, gene-QOZ80_6BG0492360, gene-QOZ80_6BG0504960, gene-QOZ80_8AG0625950, gene-QOZ80_8BG0653990
Poaceae	Hordeum vulgare	6	HORVU.MOREX.r3.1HG0083170.1, HORVU.MOREX.r3.4HG0334870.1 ... HORVU.MOREX.r3.5HG0489550.1, HORVU.MOREX.r3.5HG0498770.1, HORVU.MOREX.r3.7HG0677820.1, HORVU.MOREX.r3.7HG0751510.1
Poaceae	Lolium multiflorum	9	gene-QYE76_006047, gene-QYE76_006813, gene-QYE76_012642 ... gene-QYE76_024741, gene-QYE76_029813, gene-QYE76_037006, gene-QYE76_037081, gene-QYE76_062569, gene-QYE76_062571
Poaceae	Oryza coarctata	12	Oco11G017080, Oco12G017270, Oco12G017880, Oco15G006290 ... Oco15G011830, Oco16G006130, Oco16G010740, Oco17G007490, Oco17G010220, Oco18G007780, Oco18G010200, Oco19G002830
Poaceae	Oryza sativa	8	LOC_Os06g49810.1, LOC_Os06g51160.1, LOC_Os08g23780.1 ... LOC_Os08g38740.1, LOC_Os09g30280.1, LOC_Os09g36180.1, LOC_Os09g36190.1, LOC_Os10g21890.2
Poaceae	Paspalum vaginatum	6	gene-BS78_01G120600, gene-BS78_02G219200 ... gene-BS78_02G252500, gene-BS78_07G176500, gene-BS78_10G185900, gene-BS78_10G216500
Poaceae	Puccinellia tenuiflora	10	Pt_Chr0104938, Pt_Chr0203653, Pt_Chr0206882, Pt_Chr0207175 ... Pt_Chr0401854, Pt_Chr0404015, Pt_Chr0700005, Pt_Chr0700993, Pt_Chr0701642, Pt_Chr0701673
Poaceae	Sporobolus alterniflorus	14	Chr01G008040, Chr0G007290, Chr0G021810, Chr10G007770 ... Chr10G022450, Chr12G029350, Chr14G010370, Chr14G015950, Chr14G015960, Chr14G015970, Chr16G012540, Chr17G011860, Chr21G010510, Chr21G014990
Poaceae	Thinopyrum elongatum	7	Tel1E01G605700, Tel4E01G056800, Tel5E01G410300 ... Tel5E01G508500, Tel7E01G424000, Tel7E01G956900, Tel7E01G957700
Poaceae	Triticum dicoccoides	12	gene_TRIDC1AG054490, gene_TRIDC1BG062360 ... gene_TRIDC4AG043890, gene_TRIDC4BG004900, gene_TRIDC4BG020170, gene_TRIDC5AG040030, gene_TRIDC5AG047340, gene_TRIDC5BG042430, gene_TRIDC5BG051060, gene_TRIDC7AG030510, gene_TRIDC7AG076420, gene_TRIDC7BG021400
Poaceae	Triticum aestivum	18	TraesCS1A02G370800.2, TraesCS1B02G390000.1 ... TraesCS1D02G376900.2, TraesCS4A02G283700.1, TraesCS4B02G029400.1, TraesCS4D02G026900.1, TraesCS5A02G256400.1, TraesCS5A02G319800.1, TraesCS5B02G255700.1, TraesCS5B02G320100.2, TraesCS5D02G264700.1, TraesCS5D02G325800.2, TraesCS7A02G239100.1, TraesCS7A02G550200.1, TraesCS7B02G134900.2, TraesCS7B02G473600.1, TraesCS7D02G237000.1, TraesCSU02G105800.2
Poaceae	Zea mays	8	Zm00001eb053500_P001, Zm00001eb101530_P002 ... Zm00001eb103470_P001, Zm00001eb170740_P001, Zm00001eb217140_P002, Zm00001eb228580_P003, Zm00001eb239160_P001, Zm00001eb319550_P001
Poaceae	Zoysia japonica	3	nbis-gene-3390, nbis-gene-35292, nbis-gene-46575
Poaceae	Zoysia macrostachya	4	Zma_g3043, Zma_g32212, Zma_g32751, Zma_g33448
Portulacaceae	Portulaca oleracea	9	evm.TU.LG01.2036, evm.TU.LG04.1919, evm.TU.LG04.2367 ... evm.TU.LG06.418, evm.TU.LG07.1556, evm.TU.LG14.1217, evm.TU.LG15.1697, evm.TU.LG19.1197, evm.TU.LG24.1201
Posidoniaceae	Posidonia oceanica	4	gene.Posoc02g11470, gene.Posoc02g11480, gene.Posoc03g09130 ... gene.Posoc07g07320
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_2_RagTag.26, evm.TU.Scaffold_5_RagTag.343 ... evm.TU.Scaffold_7_RagTag.1414
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-10914, nbisL1-mrna-20, nbisL1-mrna-20079 ... nbisL1-mrna-20212, nbisL1-mrna-53, nbisL1-mrna-9907
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-13551, nbisL1-mrna-15725, nbisL1-mrna-4756
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-10472, nbisL1-mrna-13361, nbisL1-mrna-7121 ... nbisL1-mrna-7122, nbisL1-mrna-9296
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000002l.240, evm.TU.utg000006l.528 ... evm.TU.utg000009l.1223, evm.TU.utg000018l.759
Rhizophoraceae	Kandelia obovata	4	Maker00003509, Maker00005482, Maker00011722, Maker00013386
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-14079, nbisL1-mrna-3242, nbisL1-mrna-9062 ... nbisL1-mrna-9241
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-11251, nbisL1-mrna-12100, nbisL1-mrna-24141 ... nbisL1-mrna-6971
Salicaceae	Populus euphratica	6	populus_peu08426, populus_peu10498, populus_peu16911 ... populus_peu26567, populus_peu27806, populus_peu31744
Solanaceae	Lycium barbarum	4	gene-LOC132599398, gene-LOC132616213, gene-LOC132632977 ... gene-LOC132645634
Solanaceae	Solanum chilense	4	SOLCI002559700, SOLCI003417600, SOLCI004079300 ... SOLCI005586000
Solanaceae	Solanum pennellii	4	gene-LOC107002634, gene-LOC107006505, gene-LOC107007965 ... gene-LOC107017714
Tamaricaceae	Reaumuria soongarica	4	STRG.29206_chr11_+, STRG.8587_chr06_-, gene_11360, gene_2413
Tamaricaceae	Tamarix chinensis	4	TC03G2722, TC08G0010, TC09G2127, TC12G0838
Zosteraceae	Zostera marina	5	Zosma02g06360.v3.1, Zosma04g21470.v3.1, Zosma05g21800.v3.1 ... Zosma05g23600.v3.1, Zosma06g05150.v3.1