Basic Information
Locus ID:
Pt_Chr0701663
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 35796288 | 35797538 | - | Pt_Chr0701663 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 46,931.28 Da | 46.06 | 84.40 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 7 | 47 | 9.1E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 63 | 5.23E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 49 | 9.0E-8 | - |
| SMART | SM00256 | fbox_2 | 11 | 51 | 4.6E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 105 | 325 | 3.8E-25 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 5 | 42 | 8.941087 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19160.1 | F-box family protein. | 0 |
| RefSeq | XP_047051696.1 | F-box protein At1g11270-like [Lolium rigidum] | 0 |
| Q9LMB0 | Putative F-box protein At1g19160 OS=Arabidopsis thaliana OX=3702 GN=At1g19160 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6LNK4 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology