Basic Information
Locus ID:
Pt_Chr0701212
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
heat shock factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 25222941 | 25224850 | - | Pt_Chr0701212 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 51,075.21 Da | 59.71 | 65.89 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00447 | HSF-type DNA-binding | 128 | 217 | 4.5E-32 | IPR000232 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 125 | 217 | 8.71E-35 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 121 | 218 | 4.2E-37 | IPR036388 |
| SMART | SM00415 | hsfneu3 | 124 | 217 | 1.0E-58 | IPR000232 |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. | 167 | 191 | - | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 179 | 191 | 6.7E-20 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 128 | 151 | 6.7E-20 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 166 | 178 | 6.7E-20 | IPR000232 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 111 | - | - |
| Coils | Coil | Coil | 303 | 323 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62020.1 | heat shock transcription factor B2A. member of Heat Stress Transcription Factor (Hsf) family | 0 |
| RefSeq | XP_037435480.1 | heat stress transcription factor B-2c-like [Triticum dicoccoides] | 0 |
| Q652B0 | Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2C PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KKD8 | HSF_DOMAIN domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology