HalophFGD

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Basic Information
Locus ID: Pt_Chr0700950
Species & Taxonomic ID: Puccinellia tenuiflora & 240906
Genome Assembly: GCA_012064385.1
Description: domain-containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
Chr07 18639947 18640980 + Pt_Chr0700950
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.53 27,464.61 Da 49.58 87.32 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07707 BTB And C-terminal Kelch 19 105 4.2E-8 IPR011705
Gene3D G3DSA:1.25.40.420 - 6 118 6.6E-8 -
SMART SM00875 BACK_2 9 107 3.3E-4 IPR011705
Best hit
Source Best Hit ID Description E-value
TAIR AT3G61600.1 POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 0
RefSeq XP_051191053.1 BTB/POZ domain-containing protein POB1-like [Lolium perenne] 0
Swiss-Prot Q9FPW6 BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 0
TrEMBL A0A8R7QFN0 BACK domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.5HG0505050.1, HORVU.MOREX.r3.5HG0505080.1
Poaceae Lolium multiflorum 6 gene-QYE76_007033, gene-QYE76_007066, gene-QYE76_007067 ...
gene-QYE76_018534, gene-QYE76_018535, gene-QYE76_020307
Poaceae Puccinellia tenuiflora 4 Pt_Chr0402061, Pt_Chr0700949, Pt_Chr0700950, Pt_Chr0700951
Poaceae Thinopyrum elongatum 3 Tel5E01G574500, Tel5E01G575100, Tel5E01G575200
Poaceae Triticum dicoccoides 6 gene_TRIDC5AG052540, gene_TRIDC5AG052560 ...
gene_TRIDC5AG052570, gene_TRIDC5AG052580, gene_TRIDC5BG056760, gene_TRIDC5BG056770
Poaceae Triticum aestivum 9 TraesCS5A02G359000.1, TraesCS5A02G359400.1 ...
TraesCS5A02G359500.1, TraesCS5B02G361700.1, TraesCS5B02G361800.1, TraesCS5D02G368200.1, TraesCS5D02G368500.1, TraesCS5D02G368600.1, TraesCS5D02G368700.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.