Basic Information
Locus ID:
Pt_Chr0700949
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 18593784 | 18607198 | + | Pt_Chr0700949 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 118,290.23 Da | 46.99 | 89.63 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 30 | 105 | 1.72676E-13 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 703 | 782 | 6.91334E-15 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 142 | 225 | 1.6E-6 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 705 | 796 | 3.9E-15 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 30 | 119 | 4.3E-13 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 30 | 119 | 3.53E-13 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 707 | 796 | 2.39E-15 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 155 | 247 | 4.7E-5 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 687 | 840 | 1.2E-20 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 3 | 154 | 1.3E-17 | IPR011333 |
| SMART | SM00875 | BACK_2 | 808 | 913 | 0.99 | IPR011705 |
| SMART | SM00225 | BTB_4 | 698 | 799 | 1.4E-10 | IPR000210 |
| SMART | SM00225 | BTB_4 | 2 | 122 | 4.6E-11 | IPR000210 |
| SMART | SM00875 | BACK_2 | 131 | 228 | 0.011 | IPR011705 |
| SMART | SM00875 | BACK_2 | 408 | 510 | 1.4 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 17 | 90 | 13.880668 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 692 | 767 | 13.715211 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 675 | 689 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 666 | 689 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_051191053.1 | BTB/POZ domain-containing protein POB1-like [Lolium perenne] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6MWU8 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.5HG0505050.1, HORVU.MOREX.r3.5HG0505080.1 |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_007033, gene-QYE76_007066, gene-QYE76_007067 ... |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0402061, Pt_Chr0700949, Pt_Chr0700950, Pt_Chr0700951 |
| Poaceae | Thinopyrum elongatum | 3 | Tel5E01G574500, Tel5E01G575100, Tel5E01G575200 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC5AG052540, gene_TRIDC5AG052560 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS5A02G359000.1, TraesCS5A02G359400.1 ... |