HalophFGD

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Basic Information
Locus ID: Pt_Chr0700433
Species & Taxonomic ID: Puccinellia tenuiflora & 240906
Genome Assembly: GCA_012064385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Chr07 7461775 7463397 - Pt_Chr0700433
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.96 62,749.13 Da 48.55 74.04 -0.49
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 13 152 6.54E-9 IPR036047
Gene3D G3DSA:1.20.1280.50 - 13 51 3.7E-5 -
MobiDBLite mobidb-lite consensus disorder prediction 431 445 - -
MobiDBLite mobidb-lite consensus disorder prediction 431 452 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044417086.1 uncharacterized protein LOC123142139 [Triticum aestivum] 0
TrEMBL M8AFN7 F-box domain-containing protein OS=Triticum urartu OX=4572 GN=TRIUR3_13232 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Lolium multiflorum 1 gene-QYE76_057086
Poaceae Puccinellia tenuiflora 10 Pt_Chr0700237, Pt_Chr0700239, Pt_Chr0700240, Pt_Chr0700242 ...
Pt_Chr0700423, Pt_Chr0700424, Pt_Chr0700425, Pt_Chr0700427, Pt_Chr0700431, Pt_Chr0700433
Poaceae Triticum aestivum 1 TraesCS4A02G304800.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.