HalophFGD

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Basic Information
Locus ID: Pt_Chr0700390
Species & Taxonomic ID: Puccinellia tenuiflora & 240906
Genome Assembly: GCA_012064385.1
Description: Protein kinase domain
Maps and Mapping Data
Chromosome Start End Strand ID
Chr07 6467018 6469529 + Pt_Chr0700390
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.25 23,463.86 Da 38.02 80.92 -0.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00139 Legume lectin domain 29 216 3.5E-34 IPR001220
SUPERFAMILY SSF49899 Concanavalin A-like lectins/glucanases 28 212 2.21E-30 IPR013320
Gene3D G3DSA:2.60.120.200 - 29 213 9.5E-29 -
Gene Ontology
Molecular Function:
GO:0030246 (carbohydrate binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044415687.1 L-type lectin-domain containing receptor kinase SIT2-like [Triticum aestivum] 0
TrEMBL A0A3B6PT39 Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Paspalum vaginatum 1 gene-BS78_08G074700
Poaceae Puccinellia tenuiflora 2 Pt_Chr0700200, Pt_Chr0700390
Poaceae Triticum aestivum 5 TraesCS6A02G408600.1.cds1, TraesCS6A02G408700.1 ...
TraesCS6A02G408900.1, TraesCS6B02G454800.1.cds1, TraesCS6D02G392500.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.