Basic Information
Locus ID:
Pt_Chr0700240
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
motor activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 3938226 | 3939956 | + | Pt_Chr0700240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 67,179.17 Da | 61.25 | 71.44 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 9 | 49 | 2.6E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 58 | 2.49E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 7 | 59 | 4.9E-9 | - |
| SMART | SM00256 | fbox_2 | 12 | 52 | 5.4E-9 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 6 | 56 | 11.299088 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 243 | - | - |
| Coils | Coil | Coil | 225 | 245 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044417086.1 | uncharacterized protein LOC123142139 [Triticum aestivum] | 0 |
| TrEMBL | M8AFN7 | F-box domain-containing protein OS=Triticum urartu OX=4572 GN=TRIUR3_13232 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_057086 |
| Poaceae | Puccinellia tenuiflora | 10 | Pt_Chr0700237, Pt_Chr0700239, Pt_Chr0700240, Pt_Chr0700242 ... |
| Poaceae | Triticum aestivum | 1 | TraesCS4A02G304800.1.cds1 |