Basic Information
Locus ID:
Pt_Chr0700039
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 668002 | 668775 | - | Pt_Chr0700039 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.62 | 26,369.32 Da | 45.59 | 112.06 | 0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 73 | 8.1E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 154 | 172 | 1.8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 177 | 196 | 0.75 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 254 | 4.51E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 199 | 257 | 9.5E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 198 | 8.8E-33 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03010.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_047084836.1 | probable inactive leucine-rich repeat receptor kinase XIAO [Lolium rigidum] | 0 |
| TrEMBL | A0A3B6SJA3 | LRRNT_2 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology