Basic Information
Locus ID:
Pt_Chr0605618
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 174564723 | 174570177 | + | Pt_Chr0605618 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 133,138.89 Da | 45.22 | 87.65 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 760 | 843 | 3.71451E-11 | - |
| CDD | cd00028 | B_lectin | 497 | 583 | 3.70511E-24 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 511 | 594 | 1.5E-16 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 919 | 983 | 7.0E-10 | IPR001245 |
| Pfam | PF08276 | PAN-like domain | 770 | 822 | 8.7E-5 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 985 | 1145 | 3.5E-29 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 158 | 409 | 1.9E-44 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 29 | 65 | 5.7E-5 | IPR003609 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 138 | 412 | 3.96E-71 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 506 | 700 | 2.88E-27 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 901 | 1148 | 4.59E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 987 | 1161 | 8.0E-50 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 492 | 581 | 1.1E-16 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 882 | 986 | 6.1E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 218 | 427 | 2.4E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 126 | 217 | 3.5E-20 | - |
| SMART | SM00473 | ntp_6 | 767 | 845 | 0.35 | IPR003609 |
| SMART | SM00220 | serkin_6 | 917 | 1148 | 1.2E-19 | IPR000719 |
| SMART | SM00220 | serkin_6 | 155 | 412 | 1.5E-32 | IPR000719 |
| SMART | SM00473 | ntp_6 | 10 | 86 | 0.18 | IPR003609 |
| SMART | SM00108 | blect_4 | 454 | 583 | 2.2E-16 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 465 | 581 | 13.834511 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 764 | 842 | 7.923216 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 155 | 421 | 34.647392 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 917 | 1152 | 25.997385 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 263 | 275 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 923 | 944 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 999 | 1011 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 161 | 182 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_037452045.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Triticum dicoccoides] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NX53 | Non-specific serine/threonine protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology