Basic Information
Locus ID:
Pt_Chr0605419
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 168979612 | 168980694 | - | Pt_Chr0605419 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 41,403.86 Da | 30.27 | 86.81 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 8 | 44 | 4.4E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 53 | 2.88E-7 | IPR036047 |
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | 55 | 274 | 6.28E-5 | IPR011044 |
| Gene3D | G3DSA:1.20.1280.50 | - | 8 | 48 | 1.0E-6 | - |
| SMART | SM00256 | fbox_2 | 12 | 52 | 2.5E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 92 | 283 | 4.6E-21 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051222201.1 | F-box protein At5g49610-like [Lolium perenne] | 0 |
| TrEMBL | A0A3B5ZZA5 | FBA_3 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology