halophFGD

Basic Information

Locus ID: Pt_Chr0605414

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: A Receptor for Ubiquitination Targets

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr06	168961433	168962110	-	Pt_Chr0605414

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.37	26,024.27 Da	44.48	76.62	-0.49

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
TIGRFAM	TIGR01640	F_box_assoc_1: F-box protein interaction domain	5	162	3.3E-13	IPR017451

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_051222201.1	F-box protein At5g49610-like [Lolium perenne]	0
TrEMBL	A0A3B5ZZA5	FBA_3 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate04g01450
Poaceae	Echinochloa crus-galli	40	AH02.2360, AH05.2615, AH06.2492, AH07.2155, AH08.1915 ... AH08.1916, AH08.1936, AH08.1937, AH08.1938, AH08.1939, BH05.2696, BH05.2697, BH05.2698, BH07.2120, BH08.2003, BH08.2006, BH08.2007, BH08.2008, BH08.2027, BH08.2028, BH08.2029, BH08.2030, CH01.4744, CH01.4745, CH02.290, CH03.1904, CH07.2029, CH07.2892, CH07.708, CH07.709, CH08.2186, CH08.2188, CH08.2189, CH08.2190, CH08.2191, CH08.2192, CH08.2205, CH08.2206, CH08.2207, CH08.2208
Poaceae	Eleusine coracana subsp. coracana	20	gene-QOZ80_2AG0116100, gene-QOZ80_2AG0116110 ... gene-QOZ80_5BG0421620, gene-QOZ80_8AG0635480, gene-QOZ80_8AG0635490, gene-QOZ80_8AG0635500, gene-QOZ80_8AG0635510, gene-QOZ80_8AG0635530, gene-QOZ80_8AG0635760, gene-QOZ80_8AG0635770, gene-QOZ80_8AG0635800, gene-QOZ80_8AG0635810, gene-QOZ80_8BG0664320, gene-QOZ80_8BG0664480, gene-QOZ80_8BG0664510, gene-QOZ80_8BG0664520, gene-QOZ80_8BG0664530, gene-QOZ80_8BG0664540, gene-QOZ80_8BG0664550, gene-QOZ80_8BG0664560
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.2HG0206410.1.CDS1 ... HORVU.MOREX.r3.3HG0328590.1, HORVU.MOREX.r3.3HG0328700.1, HORVU.MOREX.r3.3HG0328710.1, HORVU.MOREX.r3.7HG0657500.1.CDS1, HORVU.MOREX.r3.7HG0657550.1.CDS1, HORVU.MOREX.r3.7HG0657570.1
Poaceae	Lolium multiflorum	52	gene-QYE76_000480, gene-QYE76_004239, gene-QYE76_006658 ... gene-QYE76_006741, gene-QYE76_006742, gene-QYE76_006745, gene-QYE76_006902, gene-QYE76_007508, gene-QYE76_008741, gene-QYE76_008806, gene-QYE76_009345, gene-QYE76_013006, gene-QYE76_014394, gene-QYE76_014395, gene-QYE76_014398, gene-QYE76_014400, gene-QYE76_017334, gene-QYE76_017549, gene-QYE76_018016, gene-QYE76_019903, gene-QYE76_019904, gene-QYE76_019905, gene-QYE76_019999, gene-QYE76_020064, gene-QYE76_020070, gene-QYE76_020074, gene-QYE76_020800, gene-QYE76_030923, gene-QYE76_030925, gene-QYE76_030929, gene-QYE76_030930, gene-QYE76_037914, gene-QYE76_038422, gene-QYE76_046980, gene-QYE76_055918, gene-QYE76_056424, gene-QYE76_056426, gene-QYE76_056439, gene-QYE76_057290, gene-QYE76_058262, gene-QYE76_058263, gene-QYE76_058751, gene-QYE76_058752, gene-QYE76_058754, gene-QYE76_058755, gene-QYE76_058757, gene-QYE76_058758, gene-QYE76_058759, gene-QYE76_058761, gene-QYE76_058764, gene-QYE76_065272, gene-QYE76_071875
Poaceae	Oryza coarctata	11	Oco15G011940, Oco15G011950, Oco15G011960, Oco16G010630 ... Oco16G010640, Oco16G010890, Oco23G006760, Oco23G006770, Oco24G006440, Oco24G006460, Oco24G006470
Poaceae	Oryza sativa	12	LOC_Os07g39570.1, LOC_Os08g38470.1, LOC_Os08g38480.1 ... LOC_Os08g38490.1, LOC_Os08g38520.1, LOC_Os08g38540.1, LOC_Os12g30920.1, LOC_Os12g30940.1, LOC_Os12g30950.1, LOC_Os12g30960.1, LOC_Os12g30980.1, LOC_Os12g30990.1
Poaceae	Paspalum vaginatum	3	gene-BS78_02G092300, gene-BS78_07G176700 ... gene-BS78_07G176800
Poaceae	Puccinellia tenuiflora	32	Pt_Chr0100935, Pt_Chr0200804, Pt_Chr0201487, Pt_Chr0305781 ... Pt_Chr0305832, Pt_Chr0403309, Pt_Chr0500288, Pt_Chr0500292, Pt_Chr0500301, Pt_Chr0500302, Pt_Chr0500622, Pt_Chr0500625, Pt_Chr0500681, Pt_Chr0500684, Pt_Chr0500697, Pt_Chr0504789, Pt_Chr0504790, Pt_Chr0600892, Pt_Chr0600894, Pt_Chr0605414, Pt_Chr0605415, Pt_Chr0605417, Pt_Chr0605418, Pt_Chr0605419, Pt_Chr0605421, Pt_Chr0605424, Pt_Chr0605767, Pt_Chr0605768, Pt_Chr0605769, Pt_Chr0605772, Pt_Chr0704145, Pt_Chr0704174
Poaceae	Sporobolus alterniflorus	4	Chr01G021340, Chr0G003860, Chr20G000380, Chr22G009410
Poaceae	Thinopyrum elongatum	9	Tel1E01G564300, Tel2E01G139500, Tel2E01G889300 ... Tel2E01G891100, Tel5E01G328900, Tel5E01G496600, Tel5E01G496900, Tel5E01G497000, Tel7E01G276300
Poaceae	Triticum aestivum	24	TraesCS1D02G340200.1, TraesCS2A02G060300.1 ... TraesCS2A02G060800.1, TraesCS2A02G522800.1.cds1, TraesCS2B02G552900.1.cds1, TraesCS2D02G524600.1.cds1, TraesCS2D02G524700.1.cds1, TraesCS2D02G524800.1.cds1, TraesCS2D02G525100.1.cds1, TraesCS5A02G309400.1.cds1, TraesCS5A02G309500.1.cds1, TraesCS5B02G310200.1.cds1, TraesCS5B02G310300.1.cds1, TraesCS5B02G530700.1.cds1, TraesCS5D02G316500.1.cds1, TraesCS5D02G316600.1.cds1, TraesCS7A02G140000.1.cds1, TraesCS7A02G141200.1.cds1, TraesCS7B02G041800.1.cds1, TraesCS7B02G300900.1.cds1, TraesCS7D02G141200.1.cds1, TraesCS7D02G141400.1.cds1, TraesCS7D02G142500.1.cds1, TraesCSU02G210300.1.cds1
Poaceae	Zoysia japonica	1	nbis-gene-47607