Basic Information
Locus ID:
Pt_Chr0605345
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 167127447 | 167136006 | + | Pt_Chr0605345 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 112,224.14 Da | 59.97 | 74.61 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00307 | Calponin homology (CH) domain | 82 | 198 | 1.6E-13 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 420 | 720 | 4.6E-91 | IPR001752 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 79 | 204 | 1.7E-23 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 412 | 754 | 7.01E-110 | IPR027417 |
| Gene3D | G3DSA:1.10.418.10 | - | 67 | 220 | 1.6E-28 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 407 | 763 | 1.5E-119 | IPR036961 |
| SMART | SM00033 | ch_5 | 82 | 196 | 2.6E-10 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 410 | 729 | 6.6E-143 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 80 | 198 | 18.485321 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 412 | 721 | 110.077377 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 592 | 609 | 9.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 671 | 692 | 9.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 483 | 504 | 9.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 622 | 640 | 9.2E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 761 | 804 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 902 | 998 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 761 | 783 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 890 | 1012 | - | - |
| Coils | Coil | Coil | 333 | 363 | - | - |
| Coils | Coil | Coil | 728 | 762 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10310.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_051224087.1 | kinesin-like protein KIN-14A isoform X2 [Lolium perenne] | 0 |
| B9EUM5 | Kinesin-like protein KIN-14A OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14A PE=2 SV=2 | 0 | |
| TrEMBL | A0A2K2D7I9 | Kinesin-like protein OS=Brachypodium distachyon OX=15368 GN=100825805 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology