Basic Information
Locus ID:
Pt_Chr0604809
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 144368206 | 144374579 | + | Pt_Chr0604809 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 33,276.59 Da | 31.18 | 90.24 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 54 | 274 | 3.7E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 35 | 276 | 1.48E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 121 | 293 | 3.6E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 120 | 4.9E-22 | - |
| SMART | SM00220 | serkin_6 | 50 | 282 | 1.1E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 50 | 277 | 30.082111 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 56 | 78 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 151 | 163 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04570.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 40. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_047057786.1 | uncharacterized protein LOC124664274 [Lolium rigidum] | 0 |
| Q9SYS3 | Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana OX=3702 GN=CRK40 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6C0H3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology