Basic Information
Locus ID:
Pt_Chr0604788
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 143739254 | 143740527 | - | Pt_Chr0604788 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 43,037.29 Da | 58.90 | 96.30 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 18 | 52 | 2.6E-7 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 159 | 364 | 2.35E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 64 | 3.14E-10 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 125 | 377 | 1.5E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 17 | 53 | 3.4E-6 | - |
| SMART | SM00256 | fbox_2 | 19 | 58 | 0.0021 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 13 | 49 | 9.02057 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56420.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_051196970.1 | MEIOTIC F-BOX protein MOF-like [Lolium perenne] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6QC48 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology