Basic Information
Locus ID:
Pt_Chr0604666
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 141000602 | 141001830 | + | Pt_Chr0604666 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 43,379.68 Da | 54.75 | 102.60 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 20 | 55 | 3.8E-4 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 170 | 378 | 4.32E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 58 | 7.98E-11 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 145 | 383 | 1.1E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 4 | 72 | 3.2E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 15 | 59 | 10.000863 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02930.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_051196970.1 | MEIOTIC F-BOX protein MOF-like [Lolium perenne] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6QC48 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology