Basic Information
Locus ID:
Pt_Chr0604637
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 140402429 | 140409101 | - | Pt_Chr0604637 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 157,631.13 Da | 41.48 | 91.74 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1078 | 1354 | 3.0327E-82 | - |
| Pfam | PF18052 | Rx N-terminal domain | 25 | 103 | 2.0E-6 | IPR041118 |
| Pfam | PF00931 | NB-ARC domain | 202 | 442 | 2.8E-34 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 1073 | 1348 | 6.6E-43 | IPR000719 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 195 | 461 | 3.92E-50 | IPR027417 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1048 | 1352 | 1.09E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 548 | 861 | 4.08E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1158 | 1379 | 3.8E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 541 | 895 | 1.3E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 448 | 532 | 5.4E-8 | IPR036388 |
| Gene3D | G3DSA:1.20.5.4130 | - | 24 | 138 | 2.2E-7 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 182 | 348 | 2.3E-28 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 356 | 447 | 2.4E-6 | IPR042197 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1046 | 1157 | 4.6E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1072 | 1354 | 36.498947 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1078 | 1110 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1203 | 1215 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 295 | 309 | 8.6E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 394 | 408 | 8.6E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 223 | 238 | 8.6E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 719 | 735 | 8.6E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1358 | 1417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 947 | 966 | - | - |
| Coils | Coil | Coil | 704 | 724 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28930.2 | protein kinase 1B. | 0 |
| RefSeq | XP_048532444.1 | disease resistance protein RGA5-like isoform X2 [Triticum urartu] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7QKL3 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology