Basic Information
Locus ID:
Pt_Chr0604571
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Prolyl 4-hydroxylase alpha subunit homologues.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 138606518 | 138609897 | - | Pt_Chr0604571 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.09 | 22,682.41 Da | 40.35 | 69.30 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13640 | 2OG-Fe(II) oxygenase superfamily | 77 | 195 | 2.6E-20 | IPR044862 |
| Gene3D | G3DSA:2.60.120.620 | q2cbj1_9rhob like domain | 1 | 196 | 1.9E-73 | - |
| SMART | SM00702 | p4hc | 1 | 195 | 1.3E-59 | IPR006620 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 73 | 196 | 11.667293 | IPR005123 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 45 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20270.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 0 |
| RefSeq | XP_044971354.1 | probable prolyl 4-hydroxylase 3 [Hordeum vulgare subsp. vulgare] | 0 |
| Q9LN20 | Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=1 | 0 | |
| TrEMBL | F2CSE2 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology