Basic Information
Locus ID:
Pt_Chr0604531
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 137691747 | 137696160 | + | Pt_Chr0604531 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 60,068.68 Da | 62.09 | 91.34 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 313 | 347 | 4.7E-4 | IPR001810 |
| Pfam | PF00646 | F-box domain | 34 | 72 | 5.5E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 118 | 490 | 7.2E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 33 | 98 | 5.49E-12 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 309 | 372 | 2.88E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 303 | 385 | 1.4E-5 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 26 | 110 | 9.4E-8 | - |
| SMART | SM00256 | fbox_2 | 38 | 77 | 0.0021 | IPR001810 |
| SMART | SM00256 | fbox_2 | 314 | 353 | 0.015 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 308 | 362 | 9.523964 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 32 | 86 | 10.954661 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38392.1 | - | 0 |
| RefSeq | XP_044435637.1 | MEIOTIC F-BOX protein MOF-like [Triticum aestivum] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A1E5V792 | F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0017992 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology