Basic Information
Locus ID:
Pt_Chr0604519
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 137335104 | 137336810 | - | Pt_Chr0604519 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.87 | 50,463.81 Da | 48.55 | 76.25 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 151 | 428 | 1.6E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 125 | 429 | 2.8E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 114 | 221 | 1.2E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 222 | 453 | 1.4E-51 | - |
| SMART | SM00220 | serkin_6 | 146 | 429 | 1.2E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 146 | 429 | 37.629669 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 152 | 174 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 266 | 278 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 105 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00330.1 | calmodulin-binding receptor-like cytoplasmic kinase 2. high overall homology to CRCK1 | 0 |
| RefSeq | XP_051191667.1 | calmodulin-binding receptor-like cytoplasmic kinase 2 [Lolium perenne] | 0 |
| Q8VZJ9 | Calmodulin-binding receptor-like cytoplasmic kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRCK2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6NVD4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology