Basic Information
Locus ID:
Pt_Chr0604051
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 125309990 | 125312073 | - | Pt_Chr0604051 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 75,073.92 Da | 33.64 | 82.23 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 14 | 148 | 5.08544E-25 | IPR002083 |
| CDD | cd00121 | MATH | 359 | 479 | 3.73213E-19 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 179 | 283 | 3.4E-20 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 505 | 614 | 2.4E-26 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 167 | 283 | 7.07E-25 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 357 | 484 | 4.58E-24 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 12 | 152 | 1.03E-28 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 493 | 613 | 3.34E-31 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 357 | 483 | 7.5E-20 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 157 | 315 | 3.8E-34 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 617 | 680 | 3.9E-18 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 13 | 152 | 7.7E-26 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 496 | 616 | 5.4E-36 | IPR011333 |
| SMART | SM00225 | BTB_4 | 187 | 284 | 8.3E-21 | IPR000210 |
| SMART | SM00225 | BTB_4 | 513 | 615 | 1.2E-26 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 187 | 252 | 14.666583 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 513 | 580 | 17.148424 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 358 | 479 | 13.180343 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 13 | 147 | 15.225903 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_044348381.1 | BTB/POZ and MATH domain-containing protein 3-like [Triticum aestivum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6FJZ4 | Speckle-type POZ protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_052139, gene-QYE76_052140 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g41260.1, LOC_Os11g41300.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0604051 |
| Poaceae | Triticum aestivum | 1 | TraesCS3B02G204700.1.cds1 |