halophFGD

Basic Information

Locus ID: Pt_Chr0603669

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr06	112892182	112895316	-	Pt_Chr0603669

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.64	85,664.89 Da	49.72	81.41	-0.23

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01697	Glycosyltransferase family 92	316	528	3.1E-28	IPR008166
Pfam	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain	618	771	1.0E-43	IPR006114
SUPERFAMILY	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like	617	772	1.11E-41	IPR008927
SUPERFAMILY	SSF53448	Nucleotide-diphospho-sugar transferases	315	471	5.81E-8	IPR029044
Gene3D	G3DSA:1.10.1040.10	-	610	775	1.2E-45	IPR013328
SMART	SM01350	6PGD_2	613	780	2.2E-20	IPR006114
PRINTS	PR00076	6-phosphogluconate dehydrogenase signature	744	766	1.3E-13	IPR006183
PRINTS	PR00076	6-phosphogluconate dehydrogenase signature	636	663	1.3E-13	IPR006183

Gene Ontology

Biological Process:

GO:0006098 (pentose-phosphate shunt)

Molecular Function:

GO:0004616 (phosphogluconate dehydrogenase (decarboxylating) activity) GO:0016491 (oxidoreductase activity)

KEGG Pathway

KO Term:

K00033 (6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343])

Pathway:

ko00030 (Pentose phosphate pathway) map00030 (Pentose phosphate pathway) ko00480 (Glutathione metabolism) map00480 (Glutathione metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01120 (Microbial metabolism in diverse environments) map01120 (Microbial metabolism in diverse environments) ko01200 (Carbon metabolism) map01200 (Carbon metabolism)

Module:

M00004 (Pentose phosphate pathway (Pentose phosphate cycle)) M00006 (Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P)

Reaction:

R01528 (6-Phospho-D-gluconate + NADP+ <=> D-Ribulose 5-phosphate + CO2 + NADPH + H+) R10221 (6-Phospho-D-gluconate + NAD+ <=> D-Ribulose 5-phosphate + CO2 + NADH + H+)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G37420.1	Domain of unknown function (DUF23).
RefSeq	XP_051194194.1	glycosyltransferase family 92 protein At1g27200-like [Lolium perenne]
Swiss-Prot	Q94K98	Glycosyltransferase family 92 protein At1g27200 OS=Arabidopsis thaliana OX=3702 GN=At1g27200 PE=2 SV=2
TrEMBL	F2DUS9	Glycosyltransferase family 92 protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	7	jg19879, jg22566, jg30440, jg40430, jg5454, jg7077, jg9410
Aizoaceae	Mesembryanthemum crystallinum	2	gene_3695, gene_8343
Amaranthaceae	Atriplex hortensis	2	Ah013394, Ah035866
Amaranthaceae	Beta vulgaris	1	BVRB_6g155260
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg39846, Sbi_jg42336, Sbi_jg44921, Sbi_jg55181
Amaranthaceae	Salicornia europaea	2	Seu_jg14482, Seu_jg27210
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00002337, GOSA_00014244
Amaranthaceae	Suaeda glauca	4	Sgl12378, Sgl17658, Sgl31920, Sgl37198
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000000259, gene:ENSEOMG00000002552 ... gene:ENSEOMG00000026665, gene:ENSEOMG00000036817, gene:ENSEOMG00000049746
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.1BG0001010, CQ.Regalona.r1.6AG0006770 ... CQ.Regalona.r1.6BG0007230
Anacardiaceae	Pistacia vera	2	pistato.v30023790, pistato.v30024110
Apiaceae	Apium graveolens	4	Ag11G03523, Ag3G02569, Ag5G02172, Ag7G01969
Arecaceae	Cocos nucifera	3	COCNU_08G003460, COCNU_11G002060, scaffold007915G000030
Arecaceae	Phoenix dactylifera	4	gene-LOC103701178, gene-LOC103713611, gene-LOC103714496 ... gene-LOC103724201
Asparagaceae	Asparagus officinalis	3	AsparagusV1_03.2135.V1.1, AsparagusV1_04.577.V1.1 ... AsparagusV1_10.1738.V1.1
Asteraceae	Flaveria trinervia	4	Ftri13G00736, Ftri17G06474, Ftri18G04790, Ftri18G19374
Brassicaceae	Arabidopsis thaliana	4	AT1G27200.1, AT3G27330.1, AT4G37420.1, AT5G40720.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10003629m.g.v1.0, Thhalv10007185m.g.v1.0 ... Thhalv10027280m.g.v1.0, Thhalv10028205m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g21570.v2.2, Sp2g16520.v2.2, Sp7g35080.v2.2
Brassicaceae	Brassica nigra	6	BniB02g067500.2N, BniB03g019120.2N, BniB04g007320.2N ... BniB04g039560.2N, BniB05g001520.2N, BniB06g059600.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G1944, Ceq03G1139, Ceq07G0876
Casuarinaceae	Casuarina glauca	3	Cgl02G2017, Cgl03G1232, Cgl07G0922
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno07g12990, gene.Cymno10g08230
Dunaliellaceae	Dunaliella salina	2	Dusal.0075s00016.v1.0, Dusal.0488s00008.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate08g17390, gene.Thate09g12410
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG03.881, evm.TU.LG05.207, evm.TU.LG06.75
Plantaginaceae	Plantago ovata	3	Pov_00023144, Pov_00024225, Pov_00027716
Plumbaginaceae	Limonium bicolor	2	Lb3G19875, Lb6G31768
Poaceae	Echinochloa crus-galli	7	AH06.3039, AH08.191, BH06.2826, BH08.162, CH08.52 ... Contig1701.3, Contig181.183
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_8AG0615900, gene-QOZ80_8BG0643190
Poaceae	Hordeum vulgare	9	HORVU.MOREX.r3.4HG0342210.1.CDS1 ... HORVU.MOREX.r3.4HG0342260.1.CDS1, HORVU.MOREX.r3.4HG0342280.1.CDS1, HORVU.MOREX.r3.4HG0343590.1.CDS1, HORVU.MOREX.r3.4HG0343650.1.CDS1, HORVU.MOREX.r3.6HG0573570.1.CDS1, HORVU.MOREX.r3.6HG0617970.1.CDS1, HORVU.MOREX.r3.7HG0703730.1, HORVU.MOREX.r3.7HG0751450.1.CDS1
Poaceae	Lolium multiflorum	13	gene-QYE76_002279, gene-QYE76_018629, gene-QYE76_018635 ... gene-QYE76_021072, gene-QYE76_021238, gene-QYE76_021978, gene-QYE76_028067, gene-QYE76_033503, gene-QYE76_037085, gene-QYE76_037319, gene-QYE76_046903, gene-QYE76_048234, gene-QYE76_067982
Poaceae	Oryza coarctata	3	Oco12G017900, Oco15G001020, Oco16G001180
Poaceae	Oryza sativa	2	LOC_Os06g51210.1, LOC_Os08g02850.1
Poaceae	Paspalum vaginatum	2	gene-BS78_07G025600, gene-BS78_10G263400
Poaceae	Puccinellia tenuiflora	13	Pt_Chr0100010, Pt_Chr0100011, Pt_Chr0202293, Pt_Chr0206395 ... Pt_Chr0206434, Pt_Chr0207194, Pt_Chr0303783, Pt_Chr0303792, Pt_Chr0402594, Pt_Chr0603583, Pt_Chr0603669, Pt_Chr0603672, Pt_Chr0702845
Poaceae	Sporobolus alterniflorus	6	Chr0G007260, Chr0G021780, Chr10G022470, Chr17G000430 ... Chr20G013000, Chr29G012340
Poaceae	Thinopyrum elongatum	6	Tel6E01G324300, Tel6E01G334500, Tel6E01G336800 ... Tel6E01G571100, Tel7E01G539800, Tel7E01G959200
Poaceae	Triticum dicoccoides	12	gene_TRIDC6AG023390, gene_TRIDC6AG023730 ... gene_TRIDC6AG023990, gene_TRIDC6AG048400, gene_TRIDC6BG029150, gene_TRIDC6BG029270, gene_TRIDC6BG031730, gene_TRIDC6BG056570, gene_TRIDC7AG043790, gene_TRIDC7AG076580, gene_TRIDC7BG035060, gene_TRIDC7BG073360
Poaceae	Triticum aestivum	21	TraesCS4A02G230900.1.cds1, TraesCS4A02G231000.1.cds1 ... TraesCS4D02G075500.1.cds1, TraesCS4D02G083000.1.cds1, TraesCS6A02G165300.1, TraesCS6A02G166400.1, TraesCS6A02G322700.1.cds1, TraesCS6B02G193800.1.cds1, TraesCS6B02G193900.1.cds1, TraesCS6B02G195000.1, TraesCS6B02G205700.1.cds1, TraesCS6B02G353400.1.cds1, TraesCS6D02G155000.1, TraesCS6D02G165900.1.cds1, TraesCS6D02G302600.1.cds1, TraesCS7A02G313700.1, TraesCS7A02G550900.1.cds1, TraesCS7B02G214400.1, TraesCS7B02G474300.1.cds1, TraesCS7D02G310300.1, TraesCS7D02G536800.1.cds1
Poaceae	Zea mays	2	Zm00001eb173440_P001, Zm00001eb271980_P001
Poaceae	Zoysia japonica	1	nbis-gene-41463
Poaceae	Zoysia macrostachya	2	Zma_g23545, Zma_g31172
Portulacaceae	Portulaca oleracea	5	evm.TU.LG03.333, evm.TU.LG12.1372, evm.TU.LG13.280 ... evm.TU.LG18.856, evm.TU.LG20.1020
Posidoniaceae	Posidonia oceanica	3	gene.Posoc05g01220, gene.Posoc06g15020, gene.Posoc06g15030
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_15_RagTag.687, evm.TU.Scaffold_3_RagTag.1982 ... evm.TU.Scaffold_6_RagTag.74, evm.TU.Scaffold_8_RagTag.1358
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-26872, nbisL1-mrna-9150
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-18191, nbisL1-mrna-19349, nbisL1-mrna-4702 ... nbisL1-mrna-6797
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-15295, nbisL1-mrna-15696, nbisL1-mrna-3133 ... nbisL1-mrna-66
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000001l.205, add.evm.TU.utg000018l.86 ... evm.TU.utg000011l.53, evm.TU.utg000019l.29
Rhizophoraceae	Kandelia obovata	2	Maker00001634, Maker00007146
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-11999, nbisL1-mrna-20534, nbisL1-mrna-21204 ... nbisL1-mrna-21505
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-17517, nbisL1-mrna-17816, nbisL1-mrna-18732
Salicaceae	Populus euphratica	7	populus_peu01177, populus_peu07758, populus_peu15482 ... populus_peu21889, populus_peu33124, populus_peu37634, populus_peu37710
Solanaceae	Lycium barbarum	4	gene-LOC132601899, gene-LOC132622048, gene-LOC132624038 ... gene-LOC132641444
Solanaceae	Solanum chilense	4	SOLCI000009200, SOLCI005052300, SOLCI005853000 ... SOLCI007143200
Solanaceae	Solanum pennellii	4	gene-LOC107006574, gene-LOC107009523, gene-LOC107017078 ... gene-LOC107018609
Tamaricaceae	Reaumuria soongarica	2	STRG.13995_chr05_-, STRG.31448_chr11_+
Tamaricaceae	Tamarix chinensis	4	TC01G3219, TC01G3220, TC03G0537, TC03G1233
Zosteraceae	Zostera marina	2	Zosma05g08070.v3.1, Zosma05g23580.v3.1