halophFGD

Basic Information

Locus ID: Pt_Chr0603490

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: Protein of unknown function, DUF573

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr06	100387262	100388473	+	Pt_Chr0603490

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.76	44,991.43 Da	65.20	61.56	-1.05

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF04504	Protein of unknown function, DUF573	193	278	2.5E-13	IPR007592
MobiDBLite	mobidb-lite	consensus disorder prediction	1	193	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	178	193	-	-

Gene Ontology

Biological Process:

GO:0006355 (regulation of DNA-templated transcription)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_051216604.1	uncharacterized protein LOC127334225 [Lolium perenne]	0
TrEMBL	A0A077RHH8	(bread wheat) hypothetical protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF091900020CFD_c1 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Brassicaceae	Brassica nigra	1	BniB06g054100.2N
Poaceae	Echinochloa crus-galli	9	AH07.3635, AH09.45, BH02.2324, BH07.3445, BH09.87, CH02.2490 ... CH06.1643, CH07.3515, CH09.102
Poaceae	Eleusine coracana subsp. coracana	9	gene-QOZ80_4AG0327540, gene-QOZ80_4AG0327810 ... gene-QOZ80_4AG0327920, gene-QOZ80_4AG0328150, gene-QOZ80_4BG0359970, gene-QOZ80_4BG0360250, gene-QOZ80_9AG0675040, gene-QOZ80_9AG0679020, gene-QOZ80_9BG0698830
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.3HG0225780.1.CDS1 ... HORVU.MOREX.r3.5HG0485830.1.CDS1, HORVU.MOREX.r3.6HG0561820.1.CDS1, HORVU.MOREX.r3.6HG0561940.1.CDS1, HORVU.MOREX.r3.6HG0563210.2, HORVU.MOREX.r3.6HG0618690.1.CDS1, HORVU.MOREX.r3.7HG0668950.1.CDS1
Poaceae	Lolium multiflorum	10	gene-QYE76_016834, gene-QYE76_025728, gene-QYE76_043286 ... gene-QYE76_048176, gene-QYE76_048894, gene-QYE76_049010, gene-QYE76_051877, gene-QYE76_051900, gene-QYE76_052100, gene-QYE76_052308
Poaceae	Oryza coarctata	7	Oco03G022930, Oco04G023540, Oco12G009120, Oco17G000030 ... Oco17G000090, Oco17G000550, Oco18G000160
Poaceae	Oryza sativa	5	LOC_Os01g32890.1, LOC_Os02g53150.1, LOC_Os06g30250.1 ... LOC_Os09g01140.1, LOC_Os09g03990.1
Poaceae	Paspalum vaginatum	5	gene-BS78_04G029000, gene-BS78_04G290500 ... gene-BS78_06G000700, gene-BS78_06G000800, gene-BS78_10G273800
Poaceae	Puccinellia tenuiflora	8	Pt_Chr0102370, Pt_Chr0102404, Pt_Chr0102922, Pt_Chr0203108 ... Pt_Chr0603323, Pt_Chr0603456, Pt_Chr0603490, Pt_Chr0705147
Poaceae	Sporobolus alterniflorus	10	Chr01G023370, Chr03G009260, Chr09G006860, Chr09G007530 ... Chr09G018620, Chr10G002720, Chr11G016080, Chr13G003020, Chr13G016490, Chr19G010690
Poaceae	Thinopyrum elongatum	3	Tel5E01G039900, Tel6E01G197900, Tel7E01G366400
Poaceae	Triticum dicoccoides	5	gene_TRIDC3BG016780, gene_TRIDC6AG048840 ... gene_TRIDC6BG057130, gene_TRIDC7AG025300, gene_TRIDC7BG015530
Poaceae	Triticum aestivum	13	TraesCS1B02G087500.1.cds1, TraesCS3A02G036700.1.cds1 ... TraesCS3B02G047200.1.cds1, TraesCS3B02G119900.1.cds1, TraesCS3D02G043400.1.cds1, TraesCS5D02G022400.1, TraesCS5D02G022900.1, TraesCS6A02G326000.1.cds1, TraesCS6B02G356300.1.cds1, TraesCS6D02G305700.1, TraesCS7A02G199000.1.cds1, TraesCS7B02G105700.1.cds1, TraesCS7D02G201700.1.cds1
Poaceae	Zea mays	12	Zm00001eb064430_P001, Zm00001eb149210_P001 ... Zm00001eb190050_P001, Zm00001eb213510_P001, Zm00001eb213600_P002, Zm00001eb256290_P001, Zm00001eb264080_P002, Zm00001eb264130_P002, Zm00001eb264150_P001, Zm00001eb367480_P001, Zm00001eb390570_P001, Zm00001eb418630_P001
Poaceae	Zoysia japonica	6	nbis-gene-19141, nbis-gene-28818, nbis-gene-40062 ... nbis-gene-41896, nbis-gene-46489, nbis-gene-46514
Poaceae	Zoysia macrostachya	5	Zma_g17240, Zma_g26654, Zma_g26665, Zma_g29668, Zma_g8001