Basic Information
Locus ID:
Pt_Chr0603100
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 85574916 | 85578708 | - | Pt_Chr0603100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.89 | 71,501.79 Da | 39.17 | 92.08 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 167 | 226 | 6.6E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 413 | 671 | 4.8E-35 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 65 | 1.3E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 379 | 671 | 2.39E-49 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 242 | 3.21E-42 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 486 | 674 | 3.5E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 270 | 1.1E-53 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 368 | 484 | 7.0E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 406 | 674 | 27.283579 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 329 | - | - |
| Coils | Coil | Coil | 661 | 674 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037405731.1 | protein NSP-INTERACTING KINASE 3-like [Triticum dicoccoides] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EGD1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology