Basic Information
Locus ID:
Pt_Chr0603033
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 83139265 | 83143606 | - | Pt_Chr0603033 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 83,992.30 Da | 48.20 | 95.96 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 146 | 206 | 3.4E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 64 | 3.3E-12 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 114 | 129 | 0.74 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 488 | 546 | 1.2E-12 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 24 | 340 | 9.52E-47 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 369 | 553 | 9.23E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 223 | 3.4E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 138 | 7.1E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 239 | 577 | 1.2E-55 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_051224603.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Lolium perenne] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6GR93 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology