Basic Information
Locus ID:
Pt_Chr0602955
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 80052239 | 80070302 | + | Pt_Chr0602955 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 46,240.46 Da | 42.80 | 92.71 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 271 | 386 | 1.18201E-38 | - |
| Pfam | PF00069 | Protein kinase domain | 1 | 226 | 5.6E-61 | IPR000719 |
| Pfam | PF03822 | NAF domain | 267 | 325 | 1.1E-17 | IPR004041 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 241 | 1.48E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 268 | 1.1E-85 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 269 | 390 | 4.8E-46 | - |
| SMART | SM00220 | serkin_6 | 1 | 226 | 1.9E-75 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 265 | 289 | 11.965122 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 226 | 45.219627 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 92 | 104 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24400.1 | CBL-interacting protein kinase 8. Encodes a CBL (calcineurin B-like calcium sensor proteins) -interacting serine/threonine protein kinase. Regulates the low-affinity phase of the primary nitrate response. | 0 |
| RefSeq | XP_051207620.1 | CBL-interacting protein kinase 8 isoform X1 [Lolium perenne] | 0 |
| Q5JLD8 | CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK8 PE=2 SV=1 | 0 | |
| TrEMBL | F2EJT1 | non-specific serine/threonine protein kinase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology