Basic Information
Locus ID:
Pt_Chr0602718
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 73421535 | 73421762 | - | Pt_Chr0602718 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 5,088.75 Da | 47.55 | 61.52 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51330.1 | Eukaryotic aspartyl protease family protein. | 0 |
| RefSeq | XP_047060043.1 | aspartyl protease family protein 1-like [Lolium rigidum] | 0 |
| TrEMBL | M8B2P6 | Aspartic proteinase-like protein 1 OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 18 | Sgl04409, Sgl04410, Sgl04816, Sgl09479, Sgl09480, Sgl21236 ... |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000027573 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.6BG0024640 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0602718 |
| Poaceae | Zea mays | 2 | Zm00001eb026340_P001, Zm00001eb305040_P001 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2454 |