Basic Information
Locus ID:
Pt_Chr0602311
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 60121320 | 60127434 | - | Pt_Chr0602311 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 71,472.03 Da | 45.84 | 93.48 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 373 | 624 | 5.5E-23 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 94 | 154 | 8.2E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 67 | 2.1E-9 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 155 | 6.63E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 371 | 623 | 2.99E-38 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 334 | 442 | 3.6E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 443 | 635 | 2.9E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 174 | 8.9E-38 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 360 | 628 | 18.138882 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 24 | 5.0 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 210 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010232135.1 | protein MALE DISCOVERER 2 [Brachypodium distachyon] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | I1HQB5 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100834007 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology