Basic Information
Locus ID:
Pt_Chr0602287
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 58918257 | 58922511 | - | Pt_Chr0602287 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 110,680.24 Da | 40.52 | 93.22 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 703 | 991 | 4.41446E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 68 | 126 | 1.5E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 141 | 198 | 9.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 286 | 346 | 1.8E-11 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 700 | 988 | 1.3E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 62 | 1.2E-6 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 285 | 590 | 1.26E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 696 | 989 | 6.07E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 65 | 351 | 1.9E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 783 | 1010 | 9.9E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 689 | 782 | 9.4E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 175 | 281 | 1.4E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 174 | 5.0E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 359 | 1.7E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 360 | 612 | 1.6E-65 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 235 | 259 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 89 | 113 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 333 | 357 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 114 | 137 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 522 | 546 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 309 | 332 | 60.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 697 | 990 | 5.9E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 163 | 187 | 14.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 697 | 990 | 36.286938 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 703 | 730 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 841 | 853 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 996 | 1043 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_044349867.1 | receptor-like protein kinase 5 [Triticum aestivum] | 0 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6FQ48 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology