Basic Information
Locus ID:
Pt_Chr0601803
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 44804416 | 44814530 | - | Pt_Chr0601803 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 99,056.48 Da | 40.75 | 94.40 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 580 | 846 | 2.6769E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 576 | 841 | 1.8E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 69 | 5.8E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 559 | 859 | 4.86E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 292 | 1.02E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 650 | 855 | 2.4E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 306 | 7.8E-60 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 547 | 649 | 8.5E-36 | - |
| SMART | SM00220 | serkin_6 | 574 | 850 | 2.4E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 574 | 850 | 37.983017 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 694 | 706 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 580 | 602 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 886 | 906 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_047058621.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Lolium rigidum] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6ELG5 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology