Basic Information
Locus ID:
Pt_Chr0601606
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 39594227 | 39598330 | + | Pt_Chr0601606 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 73,139.23 Da | 51.31 | 83.06 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 357 | 624 | 2.45411E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 353 | 553 | 4.0E-46 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 43 | 134 | 6.0E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 253 | 1.2E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 334 | 640 | 1.75E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 145 | 257 | 1.9E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 38 | 136 | 9.4E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 313 | 426 | 3.3E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 427 | 633 | 1.6E-60 | - |
| SMART | SM00220 | serkin_6 | 351 | 623 | 2.3E-35 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 35 | 137 | 15.402598 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 351 | 629 | 38.788654 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 143 | 257 | 16.57032 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 473 | 485 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 357 | 379 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 679 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 659 | 673 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23230.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 15. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_044977251.1 | cysteine-rich receptor-like protein kinase 15 isoform X2 [Hordeum vulgare subsp. vulgare] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | F2DBL2 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology