Basic Information
Locus ID:
Pt_Chr0601603
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 39535605 | 39541274 | + | Pt_Chr0601603 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.81 | 58,698.15 Da | 66.67 | 70.34 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 52 | 138 | 6.7E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 161 | 259 | 9.5E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 417 | 530 | 3.62E-16 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 365 | 527 | 3.0E-22 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 45 | 140 | 4.7E-14 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 149 | 263 | 3.7E-20 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 38 | 141 | 14.542648 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 147 | 263 | 16.099609 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 515 | 558 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 328 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23320.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 24. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_051208076.1 | cysteine-rich receptor-like protein kinase 10 [Lolium perenne] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6N1U8 | Cysteine-rich receptor-like protein kinase 25 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology