Basic Information
Locus ID:
Pt_Chr0601576
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 39025415 | 39032357 | + | Pt_Chr0601576 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 73,528.60 Da | 51.74 | 82.73 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 362 | 629 | 1.71139E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 358 | 560 | 3.4E-46 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 47 | 138 | 6.1E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 160 | 257 | 1.7E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 339 | 645 | 2.97E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 318 | 431 | 3.3E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 638 | 1.8E-60 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 149 | 261 | 4.5E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 42 | 140 | 9.5E-15 | IPR038408 |
| SMART | SM00220 | serkin_6 | 356 | 628 | 2.2E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 356 | 634 | 38.788654 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 147 | 261 | 16.48885 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 39 | 141 | 15.402598 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 362 | 384 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 478 | 490 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 664 | 678 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 649 | 684 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23230.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 15. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_044977251.1 | cysteine-rich receptor-like protein kinase 15 isoform X2 [Hordeum vulgare subsp. vulgare] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | F2DBL2 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology