Basic Information
Locus ID:
Pt_Chr0601573
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 38956324 | 38968696 | + | Pt_Chr0601573 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.40 | 53,448.08 Da | 71.36 | 63.61 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 337 | 396 | 8.2E-7 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 54 | 135 | 9.9E-9 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 158 | 257 | 3.4E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 472 | 3.71E-21 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 146 | 261 | 1.2E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 47 | 137 | 7.5E-10 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 322 | 468 | 5.7E-27 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 144 | 261 | 16.18108 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 292 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.2 | - | 0 |
| RefSeq | XP_047072908.1 | cysteine-rich receptor-like protein kinase 44 [Lolium rigidum] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6XM81 | Cysteine-rich receptor-like protein kinase 25 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology